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SLITRK5 SLIT and NTRK like family member 5 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 705032, updated on 7-Oct-2019

Summary

Official Symbol
SLITRK5provided by VGNC
Official Full Name
SLIT and NTRK like family member 5provided by VGNC
Primary source
VGNC:VGNC:77743
Locus tag
EGK_09399
See related
Ensembl:ENSMMUG00000002854
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs

Genomic context

See SLITRK5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (69409549..69463646)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (69118006..69126412)
Build 1.2 previous assembly Mmul_051212 (GCF_000002255.3) 17 NC_007874.1 (68047915..68055435)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene protein lin-28 homolog A pseudogene Neighboring gene uncharacterized LOC106994319 Neighboring gene uncharacterized LOC114673421 Neighboring gene uncharacterized LOC106994320

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
SLIT and NTRK-like protein 5
Names
Leucine-rich repeat-containing protein 11

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001265627.1NP_001252556.1  SLIT and NTRK-like protein 5

    See identical proteins and their annotated locations for NP_001252556.1

    Status: PROVISIONAL

    Source sequence(s)
    JV565098
    UniProtKB/TrEMBL
    F7HHZ1
    Related
    ENSMMUP00000003819.2, ENSMMUT00000004045.4
    Conserved Domains (6) summary
    smart00082
    Location:235273
    LRRCT; Leucine rich repeat C-terminal domain
    sd00031
    Location:435458
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:6279
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:129189
    LRR_8; Leucine rich repeat
    cl15307
    Location:563599
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    cl26793
    Location:86212
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    69409549..69463646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015121197.2XP_014976683.1  SLIT and NTRK-like protein 5 isoform X1

    UniProtKB/TrEMBL
    F7HHZ1
    Conserved Domains (6) summary
    smart00082
    Location:235273
    LRRCT; Leucine rich repeat C-terminal domain
    sd00031
    Location:435458
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:6279
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:129189
    LRR_8; Leucine rich repeat
    cl15307
    Location:563599
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    cl26793
    Location:86212
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
  2. XM_015121198.2XP_014976684.1  SLIT and NTRK-like protein 5 isoform X1

    UniProtKB/TrEMBL
    F7HHZ1
    Conserved Domains (6) summary
    smart00082
    Location:235273
    LRRCT; Leucine rich repeat C-terminal domain
    sd00031
    Location:435458
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:6279
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:129189
    LRR_8; Leucine rich repeat
    cl15307
    Location:563599
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    cl26793
    Location:86212
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
  3. XM_015121199.2XP_014976685.1  SLIT and NTRK-like protein 5 isoform X1

    UniProtKB/TrEMBL
    F7HHZ1
    Conserved Domains (6) summary
    smart00082
    Location:235273
    LRRCT; Leucine rich repeat C-terminal domain
    sd00031
    Location:435458
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:6279
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:129189
    LRR_8; Leucine rich repeat
    cl15307
    Location:563599
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    cl26793
    Location:86212
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

RNA

  1. XR_003724094.1 RNA Sequence

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