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IFT88 intraflagellar transport 88 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 703874, updated on 17-May-2019

Summary

Official Symbol
IFT88provided by VGNC
Official Full Name
intraflagellar transport 88provided by VGNC
See related
Ensembl:ENSMMUG00000013367
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs

Genomic context

See IFT88 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
27
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (469037..589960, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (1069630..1189398)
Build 1.2 previous assembly Mmul_051212 (GCF_000002255.3) 17 NC_007874.1 (900939..1040020, complement)

Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene EEF1A lysine methyltransferase 1 Neighboring gene thymosin beta-4 pseudogene Neighboring gene uncharacterized LOC114673534 Neighboring gene interleukin 17D Neighboring gene crystallin lambda 1 Neighboring gene uncharacterized LOC114673535 Neighboring gene uncharacterized LOC114673512

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
intraflagellar transport protein 88 homolog
Names
intraflagellar transport 88 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041770.1 Reference Mmul_10 Primary Assembly

    Range
    469037..589960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120701.2XP_014976187.1  intraflagellar transport protein 88 homolog isoform X3

    Conserved Domains (7) summary
    COG0457
    Location:393651
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:449477
    TPR; TPR repeat [structural motif]
    cd15832
    Location:194225
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:484508
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:163229
    TPR_11; TPR repeat
    pfam13424
    Location:200269
    TPR_12; Tetratricopeptide repeat
    cl24038
    Location:194295
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
  2. XM_015120702.2XP_014976188.1  intraflagellar transport protein 88 homolog isoform X4

    Conserved Domains (3) summary
    COG0457
    Location:279537
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:335363
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:370394
    TPR_1; Tetratricopeptide repeat
  3. XM_002800675.3XP_002800721.1  intraflagellar transport protein 88 homolog isoform X2

    Conserved Domains (6) summary
    sd00006
    Location:465493
    TPR; TPR repeat [structural motif]
    cd15832
    Location:210241
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:500524
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:464528
    TPR_11; TPR repeat
    pfam13424
    Location:216285
    TPR_12; Tetratricopeptide repeat
    cl24038
    Location:210311
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
  4. XM_001086373.4XP_001086373.1  intraflagellar transport protein 88 homolog isoform X1

    See identical proteins and their annotated locations for XP_001086373.1

    UniProtKB/TrEMBL
    F6X309
    Conserved Domains (7) summary
    COG0457
    Location:428686
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:484512
    TPR; TPR repeat [structural motif]
    cd15832
    Location:229260
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:519543
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:199264
    TPR_11; TPR repeat
    pfam13424
    Location:235304
    TPR_12; Tetratricopeptide repeat
    cl24038
    Location:229330
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
  5. XM_028837489.1XP_028693322.1  intraflagellar transport protein 88 homolog isoform X2

  6. XM_015120700.2XP_014976186.1  intraflagellar transport protein 88 homolog isoform X1

    UniProtKB/TrEMBL
    F6X309
    Related
    ENSMMUP00000017567.3
    Conserved Domains (7) summary
    COG0457
    Location:428686
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:484512
    TPR; TPR repeat [structural motif]
    cd15832
    Location:229260
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:519543
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:199264
    TPR_11; TPR repeat
    pfam13424
    Location:235304
    TPR_12; Tetratricopeptide repeat
    cl24038
    Location:229330
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
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