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ATG9A autophagy related 9A [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702263, updated on 3-Apr-2017

Summary

Gene symbol
ATG9A
Gene description
autophagy related 9A
Locus tag
EGK_04816
See related
Ensembl:ENSMMUG00000019619
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs

Genomic context

See ATG9A in Genome Data Viewer
Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
102 current Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (101347547..101357597, complement)
Build 1.2 previous assembly Mmul_051212 (GCF_000002255.3) 12 NC_007869.1 (83073230..83083216, complement)

Chromosome 12 - NC_027904.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene ATP binding cassette subfamily B member 6 (Langereis blood group) Neighboring gene microRNA 1240 Neighboring gene ankyrin repeat and zinc finger domain containing 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16 Neighboring gene tubulin alpha 4a

Genomic regions, transcripts, and products

Pathways from BioSystems

  • Autophagy - animal, organism-specific biosystem (from KEGG)
    Autophagy - animal, organism-specific biosystemAutophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily cons...
  • Autophagy - animal, conserved biosystem (from KEGG)
    Autophagy - animal, conserved biosystemAutophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily cons...
  • Autophagy - other, organism-specific biosystem (from KEGG)
    Autophagy - other, organism-specific biosystemAutophagy is a degradative pathway for the removal of cytoplasmic materials in eukaryotic cells, and is characterized by the formation of a double-membrane structure called the autophagosome, either ...
  • Autophagy - other, conserved biosystem (from KEGG)
    Autophagy - other, conserved biosystemAutophagy is a degradative pathway for the removal of cytoplasmic materials in eukaryotic cells, and is characterized by the formation of a double-membrane structure called the autophagosome, either ...
  • Mitophagy - animal, organism-specific biosystem (from KEGG)
    Mitophagy - animal, organism-specific biosystemMitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process calle...
  • Mitophagy - animal, conserved biosystem (from KEGG)
    Mitophagy - animal, conserved biosystemMitochondria act as the energy powerhouse of the cell, and are essential for eukaryotic cells to grow and function normally. However, deleterious byproducts of oxidative phosphorylation process calle...

General gene information

Markers

Homology

General protein information

Preferred Names
autophagy-related protein 9A
Names
ATG9 autophagy related 9 homolog A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257895.1NP_001244824.1  autophagy-related protein 9A

    See identical proteins and their annotated locations for NP_001244824.1

    Status: PROVISIONAL

    Source sequence(s)
    JU336343
    UniProtKB/TrEMBL
    F7B1E9
    Related
    ENSMMUP00000037585.2, ENSMMUT00000044562.2
    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_8.0.1 Primary Assembly

Genomic

  1. NC_027904.1 Reference Mmul_8.0.1 Primary Assembly

    Range
    101347547..101357597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015111003.1XP_014966489.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  2. XM_015110996.1XP_014966482.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  3. XM_015111005.1XP_014966491.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  4. XM_015110999.1XP_014966485.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  5. XM_015110998.1XP_014966484.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  6. XM_015110995.1XP_014966481.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  7. XM_015111006.1XP_014966492.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  8. XM_015110994.1XP_014966480.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  9. XM_015111002.1XP_014966488.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  10. XM_015110997.1XP_014966483.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  11. XM_015111001.1XP_014966487.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  12. XM_015111000.1XP_014966486.1  autophagy-related protein 9A isoform X1

    Conserved Domains (1) summary
    pfam04109
    Location:179528
    APG9; Autophagy protein Apg9
  13. XM_015111007.1XP_014966493.1  autophagy-related protein 9A isoform X2

    Conserved Domains (1) summary
    pfam04109
    Location:83432
    APG9; Autophagy protein Apg9
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