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csm4 type III-A CRISPR-associated RAMP protein Csm4 [ Thermococcus onnurineus NA1 ]

Gene ID: 7017199, updated on 22-Oct-2024
Gene symbol
csm4
Gene description
type III-A CRISPR-associated RAMP protein Csm4
Locus tag
TON_RS04585
Gene type
protein coding
Organism
Thermococcus onnurineus NA1 (strain: NA1, type-material: type strain of Thermococcus onnurineus)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
Old locus tag
TON_0896
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Sequence:
NC_011529.1 (824617..825486)

NC_011529.1Genomic Context describing neighboring genes Neighboring gene type III-A CRISPR-associated protein Csm2 Neighboring gene type III-A CRISPR-associated RAMP protein Csm3 Neighboring gene type III-A CRISPR-associated RAMP protein Csm5 Neighboring gene CRISPR-associated CARF protein Csx1 Neighboring gene alanyl-tRNA editing protein

Genomic Sequence:
NC_011529.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism. Lee HS, et al. J Bacteriol, 2008 Nov. PMID 18790866, Free PMC Article
  2. A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis. Makarova KS, et al. Nucleic Acids Res, 2002 Jan 15. PMID 11788711, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
type III-A CRISPR-associated RAMP protein Csm4

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011529.1 Reference assembly

    Range
    824617..825486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012571856.1 type III-A CRISPR-associated RAMP protein Csm4 [Thermococcus onnurineus]

    See identical proteins and their annotated locations for WP_012571856.1

    UniProtKB/Swiss-Prot
    B6YWC1
    Conserved Domains (1) summary
    cl23831
    Location:7 → 280
    Csm4_III-A; CRISPR/Cas system-associated RAMP superfamily protein Csm4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B6YWC1.1

Gene LinkOut

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Molecular Biology Databases