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THUMPD3 THUMP domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 701564, updated on 17-Aug-2024

Summary

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Official Symbol
THUMPD3provided by VGNC
Official Full Name
THUMP domain containing 3provided by VGNC
Primary source
VGNC:VGNC:79435
See related
Ensembl:ENSMMUG00000017307
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See THUMPD3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (140705051..140728877)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (57023534..57047341, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene SLIT-ROBO Rho GTPase activating protein 3 Neighboring gene uncharacterized LOC114676388 Neighboring gene phosphoglycerate mutase 1-like Neighboring gene uncharacterized LOC106996842 Neighboring gene uncharacterized LOC106996841 Neighboring gene SET domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    140705051..140728877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015130340.2 → XP_014985826.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    F7H027, G7MKS8, H9FSL6
    Related
    ENSMMUP00000039703.2, ENSMMUT00000046669.3
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020

  2. XM_015130341.2 → XP_014985827.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    F7H027, G7MKS8, H9FSL6
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020

  3. XM_015130338.2 → XP_014985824.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    F7H027, G7MKS8, H9FSL6
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020

  4. XM_015130339.2 → XP_014985825.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    F7H027, G7MKS8, H9FSL6
    Related
    ENSMMUP00000066385.1, ENSMMUT00000108460.1
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020

  5. XM_015130342.2 → XP_014985828.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    F7H027, G7MKS8, H9FSL6
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020
Nucleotide Protein
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