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Spaca9 sperm acrosome associated 9 [ Mus musculus (house mouse) ]

Gene ID: 69987, updated on 25-Sep-2020

Summary

Official Symbol
Spaca9provided by MGI
Official Full Name
sperm acrosome associated 9provided by MGI
Primary source
MGI:MGI:1917237
See related
Ensembl:ENSMUSG00000026809
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ma; MAST; 1700026L06Rik
Expression
Restricted expression toward testis adult (RPKM 423.7) See more
Orthologs
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Genomic context

See Spaca9 in Genome Data Viewer
Location:
2; 2 A3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (28582092..28589663, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (28692080..28699651, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (28547600..28555171, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene growth factor independent 1B Neighboring gene predicted gene, 52548 Neighboring gene TSC complex subunit 1 Neighboring gene adenylate kinase 8 Neighboring gene microRNA 3088 Neighboring gene high mobility group box 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Homology

Clone Names

  • MGC58459

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium-dependent protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
acrosomal vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acrosomal vesicle IDA
Inferred from Direct Assay
more info
PubMed 
cell projection IEA
Inferred from Electronic Annotation
more info
 
ciliary basal body IDA
Inferred from Direct Assay
more info
PubMed 
ciliary base IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ciliary base IDA
Inferred from Direct Assay
more info
PubMed 
cilium IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
motile cilium IEA
Inferred from Electronic Annotation
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
sperm flagellum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
sperm acrosome-associated protein 9
Names
acrosome and sperm tail protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027283.1NP_081559.1  sperm acrosome-associated protein 9

    See identical proteins and their annotated locations for NP_081559.1

    Status: PROVISIONAL

    Source sequence(s)
    BC055108
    Consensus CDS
    CCDS15845.1
    UniProtKB/Swiss-Prot
    Q7TPM5
    Related
    ENSMUSP00000099941.1, ENSMUST00000102877.7
    Conserved Domains (1) summary
    pfam15120
    Location:1163
    DUF4561; Domain of unknown function (DUF4561)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    28582092..28589663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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