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TBRG4 transforming growth factor beta regulator 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 697717, updated on 17-Aug-2024

Summary

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Official Symbol
TBRG4provided by VGNC
Official Full Name
transforming growth factor beta regulator 4provided by VGNC
Primary source
VGNC:VGNC:78151
See related
Ensembl:ENSMMUG00000010823
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TBRG4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (70109766..70121771)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (63672721..63684730)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene receptor activity modifying protein 3 Neighboring gene uncharacterized LOC114676743 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene DNA-directed RNA polymerase II subunit RPB1-like Neighboring gene DNA-directed RNA polymerase II subunit RPB1-like Neighboring gene NAC alpha domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TBRG4; FAST kinase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    70109766..70121771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015133597.2 → XP_014989083.2  FAST kinase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    F7GNY9, H9YZ45
    Conserved Domains (3) summary
    smart00952
    Location:579 → 636
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:386 → 452
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:470 → 551
    FAST_2; FAST kinase-like protein, subdomain 2

  2. XM_015133599.2 → XP_014989085.2  FAST kinase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A1D5RCT4, A0A5S6R7D8, A0A8J8XT68, G7MLC7, H9YZ45
    Related
    ENSMMUP00000069447.1, ENSMMUT00000108623.1
    Conserved Domains (3) summary
    smart00952
    Location:563 → 620
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:370 → 436
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:454 → 535
    FAST_2; FAST kinase-like protein, subdomain 2

  3. XM_015133596.2 → XP_014989082.2  FAST kinase domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    F7GNY9, H9YZ45
    Related
    ENSMMUP00000066807.1, ENSMMUT00000100274.1
    Conserved Domains (3) summary
    smart00952
    Location:579 → 636
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:386 → 452
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:470 → 551
    FAST_2; FAST kinase-like protein, subdomain 2

  4. XM_015133598.2 → XP_014989084.2  FAST kinase domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A1D5RCT4, A0A5S6R7D8, A0A8J8XT68, G7MLC7, H9YZ45
    Related
    ENSMMUP00000058127.2, ENSMMUT00000067602.2
    Conserved Domains (3) summary
    smart00952
    Location:563 → 620
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:370 → 436
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:454 → 535
    FAST_2; FAST kinase-like protein, subdomain 2

  5. XM_028845794.1 → XP_028701627.1  FAST kinase domain-containing protein 4 isoform X3

    Conserved Domains (3) summary
    smart00952
    Location:404 → 461
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:211 → 277
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:295 → 376
    FAST_2; FAST kinase-like protein, subdomain 2

  6. XM_028845795.1 → XP_028701628.1  FAST kinase domain-containing protein 4 isoform X4

    Conserved Domains (3) summary
    smart00952
    Location:388 → 445
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:195 → 261
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:277 → 360
    FAST_2; FAST kinase-like protein, subdomain 2
Nucleotide Protein
Heading Accession and Version

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