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2310043O21Rik RIKEN cDNA 2310043O21 gene [ Mus musculus (house mouse) ]

Gene ID: 69679, updated on 8-Feb-2024

Summary

Official Symbol
2310043O21Rikprovided by MGI
Official Full Name
RIKEN cDNA 2310043O21 geneprovided by MGI
Primary source
MGI:MGI:1916929
See related
Ensembl:ENSMUSG00000102106 AllianceGenome:MGI:1916929
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

See 2310043O21Rik in Genome Data Viewer
Location:
15; 15 B3.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (38549588..38595178, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (38549344..38594934, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38459 Neighboring gene predicted gene, 41308 Neighboring gene microRNA 6951 Neighboring gene antizyme inhibitor 1 Neighboring gene STARR-seq mESC enhancer starr_38461 Neighboring gene STARR-positive B cell enhancer mm9_chr15:38447814-38448115 Neighboring gene STARR-positive B cell enhancer mm9_chr15:38448868-38449169 Neighboring gene STARR-positive B cell enhancer ABC_E10850 Neighboring gene predicted gene, 41309 Neighboring gene siah E3 ubiquitin protein ligase 1, pseudogene 2 Neighboring gene predicted gene, 29697 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:38532013-38532196 Neighboring gene RIKEN cDNA 1100001I12 gene Neighboring gene STARR-positive B cell enhancer ABC_E1172 Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit C1 Neighboring gene predicted gene, 53877

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045757.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK009791
    Related
    ENSMUST00000185323.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    38549588..38595178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)