U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

2310061I04Rik RIKEN cDNA 2310061I04 gene [ Mus musculus (house mouse) ]

Gene ID: 69662, updated on 26-Sep-2022

Summary

Official Symbol
2310061I04Rikprovided by MGI
Official Full Name
RIKEN cDNA 2310061I04 geneprovided by MGI
Primary source
MGI:MGI:1916912
See related
Ensembl:ENSMUSG00000050705 AllianceGenome:MGI:1916912
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Located in mitochondrion. Is expressed in several structures, including adrenal gland; gonad; liver; lung; and spleen. Orthologous to human C6orf136 (chromosome 6 open reading frame 136). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in duodenum adult (RPKM 59.0), testis adult (RPKM 36.9) and 28 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See 2310061I04Rik in Genome Data Viewer
Location:
17; 17 B1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (36203569..36208270, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (35892677..35897378, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1, regulatory subunit 18 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 16 Neighboring gene alpha tubulin acetyltransferase 1 Neighboring gene predicted gene 16279 Neighboring gene mitochondrial ribosomal protein S18B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Clone Names

  • MGC117734

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 

General protein information

Preferred Names
uncharacterized protein C6orf136 homolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033630.1NP_001028802.1  uncharacterized protein C6orf136 homolog

    Status: VALIDATED

    Source sequence(s)
    BQ043979, BQ444983, CA459080
    Consensus CDS
    CCDS50095.1
    UniProtKB/TrEMBL
    B8JJ69
    Related
    ENSMUSP00000116278.2, ENSMUST00000148721.8
    Conserved Domains (1) summary
    pfam10184
    Location:149274
    DUF2358; Uncharacterized conserved protein (DUF2358)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    36203569..36208270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006524877.2XP_006524940.1  uncharacterized protein C6orf136 homolog isoform X2

    See identical proteins and their annotated locations for XP_006524940.1

    UniProtKB/TrEMBL
    B8JJ66
    Related
    ENSMUSP00000114151.2, ENSMUST00000148482.8
    Conserved Domains (1) summary
    pfam10184
    Location:66191
    DUF2358; Uncharacterized conserved protein (DUF2358)
  2. XM_006524875.4XP_006524938.1  uncharacterized protein C6orf136 homolog isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:114240
    PHA03247; large tegument protein UL36; Provisional
    pfam10184
    Location:242367
    DUF2358; Uncharacterized conserved protein (DUF2358)