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1700023F06Rik RIKEN cDNA 1700023F06 gene [ Mus musculus (house mouse) ]

Gene ID: 69441, updated on 31-Jan-2019

Summary

Official Symbol
1700023F06Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700023F06 geneprovided by MGI
Primary source
MGI:MGI:1916691
See related
Ensembl:ENSMUSG00000020940
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 168.3) See more

Genomic context

See 1700023F06Rik in Genome Data Viewer
Location:
11; 11 E1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (103198943..103208548, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (103060260..103069838, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene hexamethylene bis-acetamide inducible 2 Neighboring gene formin-like 1 Neighboring gene predicted gene 20511 Neighboring gene spermatogenesis associated 32 Neighboring gene predicted gene, 34823 Neighboring gene mitogen-activated protein kinase kinase kinase 14 Neighboring gene predicted gene, 39396

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Clone Names

  • MGC118352

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC69441

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001254724.2NP_001241653.1  uncharacterized protein LOC69441

    Status: VALIDATED

    Source sequence(s)
    AL662804, BF452544, BY706354
    Consensus CDS
    CCDS56814.1
    UniProtKB/TrEMBL
    A2AB62
    Related
    ENSMUSP00000021323.4, ENSMUST00000021323.10
    Conserved Domains (2) summary
    pfam13499
    Location:111167
    EF-hand_7; EF-hand domain pair
    pfam13833
    Location:121173
    EF-hand_8; EF-hand domain pair

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

    Range
    103198943..103208548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011249227.1XP_011247529.1  uncharacterized protein LOC69441 isoform X1

    Conserved Domains (2) summary
    pfam13499
    Location:441
    EF-hand_7; EF-hand domain pair
    pfam13833
    Location:147
    EF-hand_8; EF-hand domain pair

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_027082.1: Suppressed sequence

    Description
    NM_027082.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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