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1700017D01Rik RIKEN cDNA 1700017D01 gene [ Mus musculus (house mouse) ]

Gene ID: 69369, updated on 31-Jan-2019

Summary

Official Symbol
1700017D01Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700017D01 geneprovided by MGI
Primary source
MGI:MGI:1916619
See related
Ensembl:ENSMUSG00000024729
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 100.8) See more

Genomic context

See 1700017D01Rik in Genome Data Viewer
Location:
19; 19 A
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (11096814..11130889, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11171306..11205368, complement)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 8A Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 pseudogene Neighboring gene RIKEN cDNA 1700025F22 gene Neighboring gene NS1-associated protein 1 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 13 Neighboring gene RIKEN cDNA 4930526L06 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC69369

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027058.1NP_081334.1  uncharacterized protein LOC69369

    See identical proteins and their annotated locations for NP_081334.1

    Status: VALIDATED

    Source sequence(s)
    AK006056, BU938748
    Consensus CDS
    CCDS50393.1
    UniProtKB/TrEMBL
    G5E851, Q9DA92
    Related
    ENSMUSP00000025635.6, ENSMUST00000025635.7

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

    Range
    11096814..11130889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527323.3XP_006527386.1  uncharacterized protein LOC69369 isoform X2

  2. XM_006527325.3XP_006527388.1  uncharacterized protein LOC69369 isoform X4

  3. XM_011247333.1XP_011245635.1  uncharacterized protein LOC69369 isoform X1

  4. XM_011247334.1XP_011245636.1  uncharacterized protein LOC69369 isoform X3

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