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Smim23 small integral membrane protein 23 [ Mus musculus (house mouse) ]

Gene ID: 69351, updated on 19-Feb-2019

Summary

Official Symbol
Smim23provided by MGI
Official Full Name
small integral membrane protein 23provided by MGI
Primary source
MGI:MGI:1916601
See related
Ensembl:ENSMUSG00000020270
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700008A04Rik
Expression
Restricted expression toward testis adult (RPKM 48.1) See more
Orthologs

Genomic context

See Smim23 in Genome Data Viewer
Location:
11; 11 A4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (32820376..32824594, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (32720376..32724594, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene F-box and WD-40 domain protein 11 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene predicted gene, 35723 Neighboring gene ribosomal protein L9 pseudogene Neighboring gene predicted gene 12111

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small integral membrane protein 23
Names
testis specific expressed protein 4

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027050.1NP_081326.1  small integral membrane protein 23

    See identical proteins and their annotated locations for NP_081326.1

    Status: VALIDATED

    Source sequence(s)
    AK005748, AL669951
    Consensus CDS
    CCDS48767.1
    UniProtKB/Swiss-Prot
    Q9DAL0
    Related
    ENSMUSP00000020508.2, ENSMUST00000020508.3
    Conserved Domains (1) summary
    pfam15466
    Location:1135
    DUF4635; Domain of unknown function (DUF4635)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

    Range
    32820376..32824594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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