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Far1os fatty acyl CoA reductase 1, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 69295, updated on 25-Jan-2022

Summary

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Official Symbol
Far1osprovided by MGI
Official Full Name
fatty acyl CoA reductase 1, opposite strandprovided by MGI
Primary source
MGI:MGI:1916545
See related
Ensembl:ENSMUSG00000084984 AllianceGenome:MGI:1916545
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1700006P19Rik
Expression
Broad expression in CNS E11.5 (RPKM 1.4), bladder adult (RPKM 1.1) and 22 other tissues See more
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Genomic context

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See Far1os in Genome Data Viewer
Location:
7; 7 F1
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (113137233..113164194, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (113538026..113564987, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene parathyroid hormone Neighboring gene BCL2-associated transcription factor 1 pseudogene Neighboring gene fatty acyl CoA reductase 1 Neighboring gene predicted gene, 33828 Neighboring gene predicted gene, 39072

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis. Liu D, et al. Nucleic Acids Res, 2007. PMID 17158511, Free PMC Article
  2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Far1 opposite strand transcript

Clone Names

  • AC102841.2

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126544.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK005686
    Related
    ENSMUST00000138253.3

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    113137233..113164194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases