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CPR83 cuticular protein RR-2 motif 83 [ Bombyx mori (domestic silkworm) ]

Gene ID: 692375, updated on 9-Feb-2024

Summary

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Gene symbol
CPR83
Gene description
cuticular protein RR-2 motif 83
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
BmEdg84A; BmorCPR83
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Genomic context

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Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 22 NC_085128.1 (6529604..6530598)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 22 NC_051379.1 (6549766..6550760)

Chromosome 22 - NC_085128.1Genomic Context describing neighboring genes Neighboring gene cuticular protein RR-2 motif 85 Neighboring gene cuticular protein RR-2 motif 84 Neighboring gene cuticular protein RR-2 motif 82 Neighboring gene cuticular protein RR-2 motif 81

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide identification of cuticular protein genes in the silkworm, Bombyx mori. Futahashi R, et al. Insect Biochem Mol Biol, 2008 Dec. PMID 19280704
  2. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  3. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cuticular protein RR-2 motif 83

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001043373.1 → NP_001036838.1  cuticular protein RR-2 motif 83 precursor

    See identical proteins and their annotated locations for NP_001036838.1

    Status: PROVISIONAL

    Source sequence(s)
    AB017550
    UniProtKB/TrEMBL
    C0H6S5, O77057
    Conserved Domains (1) summary
    pfam00379
    Location:95 → 146
    Chitin_bind_4; Insect cuticle protein

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085128.1 Reference ASM3026992v2 Primary Assembly

    Range
    6529604..6530598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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