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FAM86DP family with sequence similarity 86 member D, pseudogene [ Homo sapiens (human) ]

Gene ID: 692099, updated on 25-Oct-2022

Summary

Official Symbol
FAM86DPprovided by HGNC
Official Full Name
family with sequence similarity 86 member D, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:32659
See related
Ensembl:ENSG00000291223 AllianceGenome:HGNC:32659
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FAM86D
Expression
Ubiquitous expression in ovary (RPKM 4.4), endometrium (RPKM 3.2) and 25 other tissues See more
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Genomic context

Location:
3p12.3
Exon count:
8
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (75421552..75435115, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (75473914..75487479, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (75470703..75484266, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905452 Neighboring gene LSP1 pseudogene 2 Neighboring gene ALG1 like 6, pseudogene Neighboring gene Sharpr-MPRA regulatory region 2645 Neighboring gene long intergenic non-protein coding RNA 2018 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024241.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139453, BC016686, BC068011, DA753838
    Related
    ENST00000459803.7

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    75421552..75435115 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021159989.1 Reference GRCh38.p14 PATCHES

    Range
    68199..81762 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    75473914..75487479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)