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Tmem160 transmembrane protein 160 [ Mus musculus (house mouse) ]

Gene ID: 69094, updated on 30-Apr-2024

Summary

Official Symbol
Tmem160provided by MGI
Official Full Name
transmembrane protein 160provided by MGI
Primary source
MGI:MGI:1916344
See related
Ensembl:ENSMUSG00000019158 AllianceGenome:MGI:1916344
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810008O21Rik
Summary
Located in mitochondrion. Orthologous to human TMEM160 (transmembrane protein 160). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 208.8), duodenum adult (RPKM 160.5) and 24 other tissues See more
Orthologs
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Genomic context

See Tmem160 in Genome Data Viewer
Location:
7 9.13 cM; 7 A2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16186867..16189415)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16452779..16455496)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57781 Neighboring gene SUMO1 activating enzyme subunit 1 Neighboring gene STARR-seq mESC enhancer starr_18132 Neighboring gene STARR-positive B cell enhancer ABC_E4898 Neighboring gene STARR-seq mESC enhancer starr_18133 Neighboring gene zinc finger CCCH-type containing 4 Neighboring gene STARR-positive B cell enhancer ABC_E347 Neighboring gene neuronal PAS domain protein 1 Neighboring gene nuclear encoded rRNA 5S 151 Neighboring gene STARR-positive B cell enhancer ABC_E10425 Neighboring gene Rho GTPase activating protein 35 Neighboring gene ribosomal protein L7A pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001418927.1NP_001405856.1  transmembrane protein 160 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC164880
  2. NM_026938.2NP_081214.1  transmembrane protein 160 isoform 1 precursor

    See identical proteins and their annotated locations for NP_081214.1

    Status: VALIDATED

    Source sequence(s)
    AC164880
    Consensus CDS
    CCDS20849.1
    UniProtKB/Swiss-Prot
    Q3TKH9, Q9D938
    Related
    ENSMUSP00000019302.9, ENSMUST00000019302.10

RNA

  1. NR_184858.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC164880
    Related
    ENSMUST00000209536.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    16186867..16189415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)