BTF3P11 basic transcription factor 3 pseudogene 11 [Homo sapiens (human)] - Gene

Summary

Official Symbol: BTF3P11provided by HGNC
Official Full Name: basic transcription factor 3 pseudogene 11provided by HGNC
Primary source: HGNC:HGNC:1126
See related: MIM:602543; AllianceGenome:HGNC:1126
Gene type: pseudo
RefSeq status: PROVISIONAL
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: OPG; OCIF; BRF3L1; BTF3L1; HUMBTFB; TNFRSF11B
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Genomic context

Location:: 13q22.3

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	13	NC_000013.11 (76928451..76929090)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	13	NC_060937.1 (76152120..76152759)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	13	NC_000013.10 (77502585..77503224)

Chromosome 13 - NC_000013.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Cross-Disorder Genome-Wide Analyses Suggest a Complex Genetic Relationship Between Tourette's Syndrome and OCD. EBI GWAS Catalog EBI GWAS CatalogPubMed
Multiple genetic loci for bone mineral density and fractures. EBI GWAS Catalog EBI GWAS CatalogPubMed
Salt-inducible kinase 3, SIK3, is a new gene associated with hearing. EBI GWAS Catalog EBI GWAS CatalogPubMed

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NoName (e-PCR)
- UniSTS:481612

RH76254 (e-PCR)
- UniSTS:84991

Other Names

BTF3 homologue
basic transcription factor 3, like 1
basic transcription factor 3-like 1, pseudogene
lambda h27A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_026983.1 RNA Sequence

Status: PROVISIONAL

Source sequence(s)

AC000403

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

NC_000013.11 Reference GRCh38.p14 Primary Assembly

Range

76928451..76929090

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

NC_060937.1 Alternate T2T-CHM13v2.0

Range

76152120..76152759

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GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NG_004671.3: Suppressed sequence

Description

NG_004671.3: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
NM_001208.1: Suppressed sequence

Description

NM_001208.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.