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Haspin histone H3 associated protein kinase [ Rattus norvegicus (Norway rat) ]

Gene ID: 687827, updated on 10-Oct-2019

Summary

Official Symbol
Haspinprovided by RGD
Official Full Name
histone H3 associated protein kinaseprovided by RGD
Primary source
RGD:1596276
See related
Ensembl:ENSRNOG00000048660
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Gsg2
Orthologs

Genomic context

See Haspin in Genome Data Viewer
Location:
10q24
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (59695403..59698398, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 10 NC_005109.3 (59434870..59437669, complement)

Chromosome 10 - NC_005109.4Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase kinase 1 Neighboring gene nuclear cap binding subunit 3 Neighboring gene integrin subunit alpha E Neighboring gene uncharacterized LOC108352105 Neighboring gene purinergic receptor P2X 5

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ATP binding ISO
Inferred from Sequence Orthology
more info
PubMed 
DNA binding ISO
Inferred from Sequence Orthology
more info
PubMed 
histone kinase activity (H3-T3 specific) IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
histone kinase activity (H3-T3 specific) ISO
Inferred from Sequence Orthology
more info
PubMed 
protein kinase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
centrosome IEA
Inferred from Electronic Annotation
more info
 
centrosome ISO
Inferred from Sequence Orthology
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
PubMed 
spindle IEA
Inferred from Electronic Annotation
more info
 
spindle ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
serine/threonine-protein kinase haspin
Names
germ cell associated 2 (haspin)

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005109.4 Reference Rnor_6.0 Primary Assembly

    Range
    59695403..59698398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003750849.4XP_003750897.1  serine/threonine-protein kinase haspin

    See identical proteins and their annotated locations for XP_003750897.1

    UniProtKB/TrEMBL
    M0RBT0
    Related
    ENSRNOP00000067027.1, ENSRNOT00000074018.1
    Conserved Domains (2) summary
    pfam12330
    Location:663743
    DUF3635; Domain of unknown function (DUF3635)
    cl21453
    Location:441610
    PKc_like; Protein Kinases, catalytic domain

Alternate Rn_Celera

Genomic

  1. AC_000078.1 Alternate Rn_Celera

    Range
    56871875..56874870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001080273.5XP_001080273.1  serine/threonine-protein kinase haspin

    See identical proteins and their annotated locations for XP_001080273.1

    UniProtKB/TrEMBL
    M0RBT0
    Conserved Domains (2) summary
    pfam12330
    Location:663743
    DUF3635; Domain of unknown function (DUF3635)
    cl21453
    Location:441610
    PKc_like; Protein Kinases, catalytic domain
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