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Pdrg1 p53 and DNA damage regulated 1 [ Mus musculus (house mouse) ]

Gene ID: 68559, updated on 31-Jan-2019

Summary

Official Symbol
Pdrg1provided by MGI
Official Full Name
p53 and DNA damage regulated 1provided by MGI
Primary source
MGI:MGI:1915809
See related
Ensembl:ENSMUSG00000027472
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pdrg; AU020945; AV006589; 1110004D19Rik
Expression
Ubiquitous expression in genital fat pad adult (RPKM 53.3), heart adult (RPKM 47.4) and 28 other tissues See more
Orthologs

Genomic context

See Pdrg1 in Genome Data Viewer
Location:
2; 2 H1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (153008890..153015383, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (152834626..152841119, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase-like 15 Neighboring gene tubulin tyrosine ligase-like family, member 9 Neighboring gene predicted gene 14199 Neighboring gene X-linked Kx blood group related 7 Neighboring gene predicted gene, 32286 Neighboring gene cerebral cavernous malformation 2-like

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
protein folding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
prefoldin complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
p53 and DNA damage-regulated protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178939.2NP_849270.1  p53 and DNA damage-regulated protein 1

    See identical proteins and their annotated locations for NP_849270.1

    Status: PROVISIONAL

    Source sequence(s)
    AL928862
    Consensus CDS
    CCDS16904.1
    UniProtKB/Swiss-Prot
    P59048
    UniProtKB/TrEMBL
    Q3UKN2
    Related
    ENSMUSP00000028972.8, ENSMUST00000028972.8
    Conserved Domains (1) summary
    cl09111
    Location:27108
    Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    153008890..153015383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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