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Mrpl13 mitochondrial ribosomal protein L13 [ Mus musculus (house mouse) ]

Gene ID: 68537, updated on 8-Dec-2022

Summary

Official Symbol
Mrpl13provided by MGI
Official Full Name
mitochondrial ribosomal protein L13provided by MGI
Primary source
MGI:MGI:2137218
See related
Ensembl:ENSMUSG00000022370 AllianceGenome:MGI:2137218
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110002D09Rik
Summary
Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in negative regulation of translation. Predicted to act upstream of or within translation. Located in mitochondrial ribosome. Is expressed in several structures, including alimentary system; early conceptus; gonad; liver; and telencephalon ventricular layer. Orthologous to human MRPL13 (mitochondrial ribosomal protein L13). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E11.5 (RPKM 43.7), liver E14 (RPKM 37.8) and 23 other tissues See more
Orthologs
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Genomic context

See Mrpl13 in Genome Data Viewer
Location:
15; 15 D1
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (55397491..55420708, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (55534095..55557312, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene collagen, type XIV, alpha 1 Neighboring gene predicted gene, 52209 Neighboring gene predicted gene, 18787 Neighboring gene Mdm2, transformed 3T3 cell double minute p53 binding protein Neighboring gene syntrophin, basic 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in mitochondrial translation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in negative regulation of translation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within translation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in mitochondrial inner membrane NAS
Non-traceable Author Statement
more info
PubMed 
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of mitochondrial large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
PubMed 
part_of mitochondrial large ribosomal subunit NAS
Non-traceable Author Statement
more info
PubMed 
located_in mitochondrial ribosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrial ribosome ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
is_active_in ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
39S ribosomal protein L13, mitochondrial
Names
L13mt
MRP-L13
NP_081035.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026759.3NP_081035.1  39S ribosomal protein L13, mitochondrial

    See identical proteins and their annotated locations for NP_081035.1

    Status: PROVISIONAL

    Source sequence(s)
    AK003283
    Consensus CDS
    CCDS27477.1
    UniProtKB/Swiss-Prot
    Q9D1P0
    Related
    ENSMUSP00000130722.2, ENSMUST00000172387.8
    Conserved Domains (1) summary
    pfam00572
    Location:17140
    Ribosomal_L13; Ribosomal protein L13

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    55397491..55420708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)