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Tmem140 transmembrane protein 140 [ Mus musculus (house mouse) ]

Gene ID: 68487, updated on 27-Jan-2018

Summary

Official Symbol
Tmem140provided by MGI
Official Full Name
transmembrane protein 140provided by MGI
Primary source
MGI:MGI:1915737
See related
Ensembl:ENSMUSG00000057137 Vega:OTTMUSG00000022811
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110007F12Rik
Expression
Ubiquitous expression in lung adult (RPKM 26.9), subcutaneous fat pad adult (RPKM 16.7) and 23 other tissues See more
Orthologs

Genomic context

See Tmem140 in Genome Data Viewer
Location:
6; 6 B1
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (34863106..34874946)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (34813146..34824946)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene ATP/GTP binding protein-like 3 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene predicted gene, 46957 Neighboring gene cell cycle regulator of NHEJ Neighboring gene WD repeat domain 91 Neighboring gene stimulated by retinoic acid gene 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_197986.2NP_932103.1  transmembrane protein 140

    See identical proteins and their annotated locations for NP_932103.1

    Status: PROVISIONAL

    Source sequence(s)
    AK030532
    Consensus CDS
    CCDS19996.1
    UniProtKB/Swiss-Prot
    Q8BGY5
    Related
    ENSMUSP00000074482.3, OTTMUSP00000026195, ENSMUST00000074949.3, OTTMUST00000054826
    Conserved Domains (1) summary
    pfam14985
    Location:7185
    TM140; TM140 protein family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    34863106..34874946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506540.1XP_006506603.1  transmembrane protein 140 isoform X1

    See identical proteins and their annotated locations for XP_006506603.1

    UniProtKB/Swiss-Prot
    Q8BGY5
    Conserved Domains (1) summary
    pfam14985
    Location:7185
    TM140; TM140 protein family
  2. XM_006506541.2XP_006506604.1  transmembrane protein 140 isoform X1

    See identical proteins and their annotated locations for XP_006506604.1

    UniProtKB/Swiss-Prot
    Q8BGY5
    Conserved Domains (1) summary
    pfam14985
    Location:7185
    TM140; TM140 protein family
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