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0610030E20Rik RIKEN cDNA 0610030E20 gene [ Mus musculus (house mouse) ]

Gene ID: 68364, updated on 31-Jan-2019

Summary

Official Symbol
0610030E20Rikprovided by MGI
Official Full Name
RIKEN cDNA 0610030E20 geneprovided by MGI
Primary source
MGI:MGI:1915614
See related
Ensembl:ENSMUSG00000058706
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI461894; 1500031N04Rik; 2810411C16Rik
Expression
Ubiquitous expression in bladder adult (RPKM 9.3), thymus adult (RPKM 9.1) and 28 other tissues See more
Orthologs

Genomic context

See 0610030E20Rik in Genome Data Viewer
Location:
6 C1; 6
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (72347199..72353162)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (72297311..72303156)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene surfactant associated protein B Neighboring gene ubiquitin specific peptidase 39 Neighboring gene transmembrane protein 150A Neighboring gene ring finger protein 181 Neighboring gene vesicle-associated membrane protein 5

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
UPF0561 protein C2orf68 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026696.1NP_080972.1  UPF0561 protein C2orf68 homolog

    See identical proteins and their annotated locations for NP_080972.1

    Status: VALIDATED

    Source sequence(s)
    AC116115, BB844069, BC066053, BE945833
    Consensus CDS
    CCDS51808.1
    UniProtKB/Swiss-Prot
    Q149G0
    Related
    ENSMUSP00000076957.3, ENSMUST00000077783.4
    Conserved Domains (1) summary
    pfam10573
    Location:4126
    UPF0561; uncharacterized protein family UPF0561

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

    Range
    72347199..72353162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506534.3XP_006506597.1  UPF0561 protein C2orf68 homolog isoform X1

    See identical proteins and their annotated locations for XP_006506597.1

    Conserved Domains (1) summary
    pfam10573
    Location:116211
    UPF0561; uncharacterized protein family UPF0561

Reference GRCm38.p4 PATCHES

Genomic

  1. NW_006763129.1 Reference GRCm38.p4 PATCHES

    Range
    50600..56445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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