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4930591A17Rik RIKEN cDNA 4930591A17 gene [ Mus musculus (house mouse) ]

Gene ID: 68175, updated on 27-Nov-2024

Summary

Official Symbol
4930591A17Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930591A17 geneprovided by MGI
Primary source
MGI:MGI:1915425
See related
Ensembl:ENSMUSG00000039138 AllianceGenome:MGI:1915425
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 7.9) See more
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Genomic context

See 4930591A17Rik in Genome Data Viewer
Location:
2 H4; 2 101.85 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (179056729..179058673)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (179414936..179416880)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_06712 Neighboring gene Wilms' tumour 1-associating protein pseudogene Neighboring gene STARR-seq mESC enhancer starr_06713 Neighboring gene predicted gene 14294 Neighboring gene STARR-seq mESC enhancer starr_06714 Neighboring gene predicted gene, 36004 Neighboring gene cadherin 4 Neighboring gene STARR-seq mESC enhancer starr_06718 Neighboring gene STARR-seq mESC enhancer starr_06719 Neighboring gene STARR-seq mESC enhancer starr_06720 Neighboring gene STARR-seq mESC enhancer starr_06721 Neighboring gene STARR-seq mESC enhancer starr_06722 Neighboring gene predicted gene, 36066

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC68175

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026596.2NP_080872.1  uncharacterized protein LOC68175

    See identical proteins and their annotated locations for NP_080872.1

    Status: PREDICTED

    Source sequence(s)
    AK019837
    UniProtKB/TrEMBL
    Q9CQH6
    Related
    ENSMUST00000250547.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    179056729..179058673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)