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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_013360.1 RefSeqGene
- Range
-
5019..25478
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001165903.2 → NP_001159375.1 syntaxin-1A isoform 2
See identical proteins and their annotated locations for NP_001159375.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an internal segment in the 3' coding region, as compared to variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus, as compared to isoform 1.
- Source sequence(s)
-
BC000444, BC064644, DA159446
- Consensus CDS
-
CCDS55120.1
- UniProtKB/Swiss-Prot
-
Q16623
- Related
- ENSP00000378585.3, ENST00000395156.7
- Conserved Domains (1) summary
-
- pfam00804
Location:30 → 226
- Syntaxin; Syntaxin
-
NM_004603.4 → NP_004594.1 syntaxin-1A isoform 1
See identical proteins and their annotated locations for NP_004594.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
BC003011, BC064644, DA159446
- Consensus CDS
-
CCDS34655.1
- UniProtKB/Swiss-Prot
-
Q16623
- UniProtKB/TrEMBL
-
Q75ME0
- Related
- ENSP00000222812.3, ENST00000222812.8
- Conserved Domains (2) summary
-
- pfam00804
Location:30 → 227
- Syntaxin
- pfam05739
Location:228 → 279
- SNARE; SNARE domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p13 Primary Assembly
- Range
-
73699210..73719673 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017012567.2 → XP_016868056.1 syntaxin-1A isoform X1
RNA
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XR_242263.2 RNA Sequence
-
XR_927527.2 RNA Sequence