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Fam32a family with sequence similarity 32, member A [ Mus musculus (house mouse) ]

Gene ID: 67922, updated on 30-Apr-2024

Summary

Official Symbol
Fam32aprovided by MGI
Official Full Name
family with sequence similarity 32, member Aprovided by MGI
Primary source
MGI:MGI:1915172
See related
Ensembl:ENSMUSG00000003039 AllianceGenome:MGI:1915172
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Otag12; OTAG-12; 2510049I19Rik
Summary
Predicted to act upstream of or within apoptotic process. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human FAM32A (family with sequence similarity 32 member A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 38.9), CNS E14 (RPKM 36.4) and 28 other tissues See more
Orthologs
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Genomic context

See Fam32a in Genome Data Viewer
Location:
8 B3.3; 8 34.9 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (72973589..72978878)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (72219745..72225034)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene hematopoietic SH2 domain containing Neighboring gene calcium and integrin binding family member 3 Neighboring gene STARR-positive B cell enhancer ABC_E9026 Neighboring gene STARR-positive B cell enhancer ABC_E2266 Neighboring gene predicted gene, 51536 Neighboring gene adaptor-related protein complex AP-1, mu subunit 1 Neighboring gene STARR-positive B cell enhancer ABC_E5019 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:74802980-74803318 Neighboring gene predicted gene, 51537

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in biological_process ND
No biological Data available
more info
 
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein FAM32A
Names
ovarian tumor associated gene-12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026455.5NP_080731.1  protein FAM32A

    See identical proteins and their annotated locations for NP_080731.1

    Status: VALIDATED

    Source sequence(s)
    AC158898
    Consensus CDS
    CCDS52595.1
    UniProtKB/Swiss-Prot
    Q8K5E4, Q9CR80
    Related
    ENSMUSP00000003123.9, ENSMUST00000003123.10

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    72973589..72978878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)