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Coq9 coenzyme Q9 [ Mus musculus (house mouse) ]

Gene ID: 67914, updated on 1-Mar-2024

Summary

Official Symbol
Coq9provided by MGI
Official Full Name
coenzyme Q9provided by MGI
Primary source
MGI:MGI:1915164
See related
Ensembl:ENSMUSG00000031782 AllianceGenome:MGI:1915164
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2310005O14Rik
Summary
Predicted to enable lipid binding activity and protein homodimerization activity. Involved in ubiquinone biosynthetic process. Acts upstream of or within mitochondrial electron transport, NADH to ubiquinone. Located in mitochondrion. Used to study coenzyme Q10 deficiency disease. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 5. Orthologous to human COQ9 (coenzyme Q9). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in heart adult (RPKM 226.6), adrenal adult (RPKM 140.4) and 28 other tissues See more
Orthologs
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Genomic context

See Coq9 in Genome Data Viewer
Location:
8 C5; 8 46.89 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (95565041..95581523)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (94838413..94854895)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 17 Neighboring gene cytokine induced apoptosis inhibitor 1 Neighboring gene STARR-seq mESC enhancer starr_22366 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10518 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide C Neighboring gene docking protein 4 Neighboring gene coiled-coil domain containing 102A Neighboring gene STARR-positive B cell enhancer mm9_chr8:97441323-97441623

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
ubiquinone biosynthesis protein COQ9, mitochondrial
Names
coenzyme Q9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026452.3NP_080728.1  ubiquinone biosynthesis protein COQ9, mitochondrial precursor

    See identical proteins and their annotated locations for NP_080728.1

    Status: VALIDATED

    Source sequence(s)
    AC129606
    Consensus CDS
    CCDS22550.1
    UniProtKB/Swiss-Prot
    Q8K1Z0, Q9CT61
    UniProtKB/TrEMBL
    F6SFF5
    Related
    ENSMUSP00000034234.9, ENSMUST00000034234.15
    Conserved Domains (2) summary
    TIGR02396
    Location:97276
    diverge_rpsU; rpsU-divergently transcribed protein
    pfam08511
    Location:205275
    COQ9; COQ9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    95565041..95581523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)