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Echdc3 enoyl Coenzyme A hydratase domain containing 3 [ Mus musculus (house mouse) ]

Gene ID: 67856, updated on 31-Jan-2019

Summary

Official Symbol
Echdc3provided by MGI
Official Full Name
enoyl Coenzyme A hydratase domain containing 3provided by MGI
Primary source
MGI:MGI:1915106
See related
Ensembl:ENSMUSG00000039063
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI662097; 2310005D12Rik
Expression
Biased expression in liver adult (RPKM 51.3), liver E18 (RPKM 34.2) and 13 other tissues See more
Orthologs

Genomic context

See Echdc3 in Genome Data Viewer
Location:
2; 2 A1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (6188465..6212994, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (6109511..6134040, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene proline and serine rich 2 Neighboring gene TRAF-interacting protein pseudogene Neighboring gene predicted gene 10857 Neighboring gene RIKEN cDNA A230108P19 gene Neighboring gene predicted gene, 30185 Neighboring gene predicted gene, 46730 Neighboring gene predicted gene 13383 Neighboring gene USP6 N-terminal like Neighboring gene predicted gene 13388

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
mitochondrion HDA PubMed 

General protein information

Preferred Names
enoyl-CoA hydratase domain-containing protein 3, mitochondrial

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024208.4NP_077170.2  enoyl-CoA hydratase domain-containing protein 3, mitochondrial precursor

    See identical proteins and their annotated locations for NP_077170.2

    Status: PROVISIONAL

    Source sequence(s)
    AK009166
    Consensus CDS
    CCDS15672.1
    UniProtKB/Swiss-Prot
    Q9D7J9
    Related
    ENSMUSP00000037371.2, ENSMUST00000042658.4
    Conserved Domains (1) summary
    cl23717
    Location:35299
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    6188465..6212994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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