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SCARNA6 small Cajal body-specific RNA 6 [ Homo sapiens (human) ]

Gene ID: 677772, updated on 10-Oct-2019

Summary

Official Symbol
SCARNA6provided by HGNC
Official Full Name
small Cajal body-specific RNA 6provided by HGNC
Primary source
HGNC:HGNC:32562
See related
Ensembl:ENSG00000251791 MIM:615641
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U88

Genomic context

See SCARNA6 in Genome Data Viewer
Location:
2q37.1
Exon count:
1
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (233288676..233288941)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (234197322..234197587)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-5-phosphatase D Neighboring gene RNA, 7SL, cytoplasmic 32, pseudogene Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 5 Neighboring gene S-antigen visual arrestin Neighboring gene diacylglycerol kinase delta Neighboring gene Sharpr-MPRA regulatory region 11245

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003006.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AY077738
    Related
    ENST00000515982.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    233288676..233288941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_011332690.1 Reference GRCh38.p13 PATCHES

    Range
    234014..234279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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