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SCARNA22 small Cajal body-specific RNA 22 [ Homo sapiens (human) ]

Gene ID: 677770, updated on 23-Nov-2021

Summary

Official Symbol
SCARNA22provided by HGNC
Official Full Name
small Cajal body-specific RNA 22provided by HGNC
Primary source
HGNC:HGNC:32580
See related
Ensembl:ENSG00000249784
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACA11
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Genomic context

See SCARNA22 in Genome Data Viewer
Location:
4p16.3
Exon count:
1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (1974636..1974760)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (1976363..1976487)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene leucine zipper and EF-hand containing transmembrane protein 1 Neighboring gene RNA, 7SL, cytoplasmic 671, pseudogene Neighboring gene nuclear receptor binding SET domain protein 2 Neighboring gene negative elongation factor complex member A Neighboring gene microRNA 943 Neighboring gene chromosome 4 open reading frame 48

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • ACA11 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Cajal body IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003004.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AJ609470
    Related
    ENST00000503991.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    1974636..1974760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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