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SCARNA17 small Cajal body-specific RNA 17 [ Homo sapiens (human) ]

Gene ID: 677769, updated on 25-Jan-2022

Summary

Official Symbol
SCARNA17provided by HGNC
Official Full Name
small Cajal body-specific RNA 17provided by HGNC
Primary source
HGNC:HGNC:32574
See related
Ensembl:ENSG00000267322 MIM:615645; AllianceGenome:HGNC:32574
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U91
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Genomic context

See SCARNA17 in Genome Data Viewer
Location:
18q21.1
Exon count:
1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (49814023..49814443)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (47340393..47340813)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984031 Neighboring gene acetyl-CoA acyltransferase 2 Neighboring gene small nucleolar RNA host gene 22 Neighboring gene myosin VB Neighboring gene Sharpr-MPRA regulatory region 7262 Neighboring gene RNA, 5S ribosomal pseudogene 457

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • mgU12-22/U4-8

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Cajal body IEA
Inferred from Electronic Annotation
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003003.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BK005569
    Related
    ENST00000615535.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    49814023..49814443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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