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rpl31 ribosomal protein L31 [ Danio rerio (zebrafish) ]

Gene ID: 677758, updated on 1-Aug-2018

Summary

Official Symbol
rpl31provided by ZNC
Official Full Name
ribosomal protein L31provided by ZNC
Primary source
ZFIN:ZDB-GENE-060331-121
See related
Ensembl:ENSDARG00000053365 Vega:OTTDARG00000034066
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fe38a04; wu:fe38a04; zgc:136896
Orthologs

Genomic context

See rpl31 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (56225410..56232296, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (56637635..56644521, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene ectodysplasin A receptor Neighboring gene uncharacterized LOC100333807 Neighboring gene TBC1 domain family member 8 Neighboring gene CCR4-NOT transcription complex, subunit 11 Neighboring gene lymphocyte cytosolic protein 1 (L-plastin)

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC136896

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular IEA
Inferred from Electronic Annotation
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040052.2NP_001035141.1  60S ribosomal protein L31

    Status: VALIDATED

    Source sequence(s)
    CU914623, EH441458, EH539710
    UniProtKB/TrEMBL
    Q24JV3
    Related
    ENSDARP00000124804.1, OTTDARP00000037727, ENSDART00000149554.3, OTTDART00000048073
    Conserved Domains (1) summary
    pfam01198
    Location:1798
    Ribosomal_L31e; Ribosomal protein L31e

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    56225410..56232296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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