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Mxra7 matrix-remodelling associated 7 [ Mus musculus (house mouse) ]

Gene ID: 67622, updated on 26-Sep-2022

Summary

Official Symbol
Mxra7provided by MGI
Official Full Name
matrix-remodelling associated 7provided by MGI
Primary source
MGI:MGI:1914872
See related
Ensembl:ENSMUSG00000020814 AllianceGenome:MGI:1914872
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1810057P16Rik; E130302J09Rik
Summary
Predicted to be located in endoplasmic reticulum. Is expressed in ganglia; medulla oblongata basal plate mantle layer; retina; and trigeminal nerve. Orthologous to human MXRA7 (matrix remodeling associated 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 24.9), ovary adult (RPKM 13.8) and 23 other tissues See more
Orthologs
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Genomic context

See Mxra7 in Genome Data Viewer
Location:
11; 11 E2
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (116694226..116718953, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (116803400..116828127, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene cDNA sequence BC018473 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 Neighboring gene jumonji domain containing 6 Neighboring gene methyltransferase like 23 Neighboring gene serine and arginine-rich splicing factor 2 Neighboring gene major facilitator superfamily domain containing 11

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
matrix-remodeling-associated protein 7
Names
transmembrane anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001347633.1NP_001334562.1  matrix-remodeling-associated protein 7 isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AL645542, BC075618, BE982207
    Consensus CDS
    CCDS83937.1
    UniProtKB/TrEMBL
    Q9D1T2
    Related
    ENSMUSP00000038213.6, ENSMUST00000047715.12
  2. NM_026280.3NP_080556.1  matrix-remodeling-associated protein 7 isoform 1 precursor

    See identical proteins and their annotated locations for NP_080556.1

    Status: VALIDATED

    Source sequence(s)
    AK075801, CX734756
    Consensus CDS
    CCDS25677.1
    UniProtKB/Swiss-Prot
    Q8C6F8, Q9CZH7
    Related
    ENSMUSP00000021170.3, ENSMUST00000021170.9

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    116694226..116718953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006534006.4XP_006534069.1  matrix-remodeling-associated protein 7 isoform X2

  2. XM_036156914.1XP_036012807.1  matrix-remodeling-associated protein 7 isoform X1

    UniProtKB/TrEMBL
    Q9D1T2

RNA

  1. XR_001780042.2 RNA Sequence