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Slc25a30 solute carrier family 25, member 30 [ Mus musculus (house mouse) ]

Gene ID: 67554, updated on 5-Mar-2024

Summary

Official Symbol
Slc25a30provided by MGI
Official Full Name
solute carrier family 25, member 30provided by MGI
Primary source
MGI:MGI:1914804
See related
Ensembl:ENSMUSG00000022003 AllianceGenome:MGI:1914804
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
KMCP1; 4933433D23Rik
Summary
Predicted to enable C4-dicarboxylate transmembrane transporter activity; antiporter activity; and sulfur compound transmembrane transporter activity. Predicted to be involved in anion transport. Located in mitochondrion. Is expressed in adrenal medulla; ganglia; medulla oblongata basal plate mantle layer; and metanephros. Orthologous to human SLC25A30 (solute carrier family 25 member 30). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in adrenal adult (RPKM 6.9), ovary adult (RPKM 6.5) and 25 other tissues See more
Orthologs
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Genomic context

See Slc25a30 in Genome Data Viewer
Location:
14 D3; 14 40.29 cM
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (75994986..76024477, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (75757534..75787037, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene glutamate rich 6B Neighboring gene predicted gene, 23622 Neighboring gene component of oligomeric golgi complex 3 Neighboring gene STARR-seq mESC enhancer starr_37146 Neighboring gene STARR-positive B cell enhancer ABC_E9050 Neighboring gene STARR-seq mESC enhancer starr_37147 Neighboring gene predicted gene, 36271 Neighboring gene STARR-positive B cell enhancer ABC_E8900 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:76234679-76234835 Neighboring gene predicted gene 4285

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables solute:inorganic anion antiporter activity ISO
Inferred from Sequence Orthology
more info
 
enables transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in inorganic anion transport ISO
Inferred from Sequence Orthology
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
kidney mitochondrial carrier protein 1
Names
VH186.2-D-J-C mu

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026232.3NP_080508.1  kidney mitochondrial carrier protein 1

    See identical proteins and their annotated locations for NP_080508.1

    Status: PROVISIONAL

    Source sequence(s)
    AC122285
    Consensus CDS
    CCDS27281.1
    UniProtKB/Swiss-Prot
    Q3UAD0, Q9CR58
    Related
    ENSMUSP00000022580.7, ENSMUST00000022580.8
    Conserved Domains (2) summary
    PTZ00169
    Location:9289
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:199289
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    75994986..76024477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006519456.5XP_006519519.1  kidney mitochondrial carrier protein 1 isoform X2

    UniProtKB/TrEMBL
    Q8R206
    Conserved Domains (1) summary
    pfam00153
    Location:105191
    Mito_carr; Mitochondrial carrier protein
  2. XM_006519455.5XP_006519518.1  kidney mitochondrial carrier protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:105191
    Mito_carr; Mitochondrial carrier protein