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1700019N19Rik RIKEN cDNA 1700019N19 gene [ Mus musculus (house mouse) ]

Gene ID: 67507, updated on 25-Sep-2020

Summary

Official Symbol
1700019N19Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700019N19 geneprovided by MGI
Primary source
MGI:MGI:1914757
See related
Ensembl:ENSMUSG00000026931
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 160.1) See more
Orthologs
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Genomic context

See 1700019N19Rik in Genome Data Viewer
Location:
19; 19 D2
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (58774233..58782846, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (58785801..58794414, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (58860293..58868904, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene pancreatic lipase-related protein 2 Neighboring gene predicted gene, 52394 Neighboring gene predicted gene, 41877 Neighboring gene heat shock protein 12A Neighboring gene predicted gene, 52393

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C10orf82 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368688.1NP_001355617.1  uncharacterized protein C10orf82 homolog isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC127545
    Consensus CDS
    CCDS89423.1
    Related
    ENSMUSP00000126241.1, ENSMUST00000166692.1
  2. NM_001368689.1NP_001355618.1  uncharacterized protein C10orf82 homolog isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC127545
    Consensus CDS
    CCDS89423.1
  3. NM_026208.2NP_080484.1  uncharacterized protein C10orf82 homolog isoform 1

    See identical proteins and their annotated locations for NP_080484.1

    Status: VALIDATED

    Source sequence(s)
    AK006135
    Consensus CDS
    CCDS38031.1
    UniProtKB/Swiss-Prot
    Q9CQT6
    UniProtKB/TrEMBL
    A0A0R4J076
    Related
    ENSMUSP00000028299.4, ENSMUST00000028299.10

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    58774233..58782846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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