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1700022I11Rik RIKEN cDNA 1700022I11 gene [ Mus musculus (house mouse) ]

Gene ID: 67317, updated on 31-Jan-2019

Summary

Official Symbol
1700022I11Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700022I11 geneprovided by MGI
Primary source
MGI:MGI:1914567
See related
Ensembl:ENSMUSG00000028451
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 4.2) See more
Orthologs

Genomic context

See 1700022I11Rik in Genome Data Viewer
Location:
4 A5; 4
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (42969946..42974325)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (42982832..42987197)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 205, member C Neighboring gene PHD finger protein 24 Neighboring gene DnaJ heat shock protein family (Hsp40) member B5 Neighboring gene valosin containing protein Neighboring gene Fanconi anemia, complementation group G

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C9orf131 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026088.3NP_080364.1  uncharacterized protein C9orf131 homolog

    See identical proteins and their annotated locations for NP_080364.1

    Status: VALIDATED

    Source sequence(s)
    AK006242, AK133216, AL672276
    Consensus CDS
    CCDS51160.1
    UniProtKB/Swiss-Prot
    Q3V0E1
    Related
    ENSMUSP00000030163.5, ENSMUST00000030163.11
    Conserved Domains (1) summary
    pfam14650
    Location:172296
    FAM75; FAM75 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

    Range
    42969946..42974325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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