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Nanp N-acetylneuraminic acid phosphatase [ Mus musculus (house mouse) ]

Gene ID: 67311, updated on 31-Jan-2019

Summary

Official Symbol
Nanpprovided by MGI
Official Full Name
N-acetylneuraminic acid phosphataseprovided by MGI
Primary source
MGI:MGI:1914561
See related
Ensembl:ENSMUSG00000053916
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hdhd4; 1600031M04Rik
Expression
Broad expression in liver E14 (RPKM 18.1), liver E14.5 (RPKM 15.0) and 18 other tissues See more
Orthologs

Genomic context

See Nanp in Genome Data Viewer
Location:
2; 2 G3
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (151029685..151039379, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (150855421..150865115, complement)

Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E-binding protein 1 pseudogene Neighboring gene ninein-like Neighboring gene ribosomal protein L7A pseudogene Neighboring gene predicted gene 14151 Neighboring gene predicted gene 14147

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC103377

Gene Ontology Provided by MGI

Function Evidence Code Pubs
N-acylneuraminate-9-phosphatase activity ISO
Inferred from Sequence Orthology
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
N-acetylneuraminate biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
dephosphorylation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
N-acylneuraminate-9-phosphatase
Names
haloacid dehalogenase-like hydrolase domain containing 4
haloacid dehalogenase-like hydrolase domain-containing protein 4
neu5Ac-9-Pase
NP_080362.1
XP_006500131.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_026086.2NP_080362.1  N-acylneuraminate-9-phosphatase

    See identical proteins and their annotated locations for NP_080362.1

    Status: VALIDATED

    Source sequence(s)
    AL808125, BC083086
    Consensus CDS
    CCDS16864.1
    UniProtKB/Swiss-Prot
    Q9CPT3
    Related
    ENSMUSP00000063895.4, ENSMUST00000066640.4
    Conserved Domains (2) summary
    TIGR02253
    Location:6234
    CTE7; HAD superfamily (subfamily IA) hydrolase, TIGR02253
    cl21460
    Location:114239
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

    Range
    151029685..151039379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006500068.3XP_006500131.1  N-acylneuraminate-9-phosphatase isoform X1

    See identical proteins and their annotated locations for XP_006500131.1

    Conserved Domains (1) summary
    cl21460
    Location:106231
    HAD_like; Haloacid Dehalogenase-like Hydrolases
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