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Myl12a myosin, light chain 12A, regulatory, non-sarcomeric [ Mus musculus (house mouse) ]

Gene ID: 67268, updated on 26-Sep-2022

Summary

Official Symbol
Myl12aprovided by MGI
Official Full Name
myosin, light chain 12A, regulatory, non-sarcomericprovided by MGI
Primary source
MGI:MGI:1914518
See related
Ensembl:ENSMUSG00000024048 AllianceGenome:MGI:1914518
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2900073G15Rik
Summary
Enables glutamate receptor binding activity. Acts upstream of or within protein localization to plasma membrane and regulation of cell shape. Located in Z disc and stress fiber. Part of myosin II complex. Orthologous to human MYL12A (myosin light chain 12A). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 191.4), heart adult (RPKM 159.8) and 28 other tissues See more
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Genomic context

See Myl12a in Genome Data Viewer
Location:
17; 17 E1.3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (71300788..71309528, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (70993793..71002533, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46595 Neighboring gene predicted gene, 41611 Neighboring gene myosin, light chain 12B, regulatory Neighboring gene predicted gene, 53974 Neighboring gene myomesin 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables glutamate receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in Z disc IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell cortex ISO
Inferred from Sequence Orthology
more info
 
part_of myosin II complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in stress fiber IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
myosin light chain, regulatory B-like
Names
NMDA receptor-interacting protein
brain specific myosin regulatory light chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357820.1NP_001344749.1  myosin light chain, regulatory B-like isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC154187, AI838292, BF661452, DV063953
    UniProtKB/TrEMBL
    A0A6P7QQW7
    Conserved Domains (1) summary
    COG5126
    Location:25175
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
  2. NM_026064.2NP_080340.2  myosin light chain, regulatory B-like isoform 1

    See identical proteins and their annotated locations for NP_080340.2

    Status: VALIDATED

    Source sequence(s)
    AK045160, BY258797, BY319676, CAAA01075437
    Consensus CDS
    CCDS28955.1
    UniProtKB/TrEMBL
    A0A6P7QN68, Q6ZWQ9
    Related
    ENSMUSP00000123412.2, ENSMUST00000148960.8
    Conserved Domains (1) summary
    COG5126
    Location:19169
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    71300788..71309528 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)