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Acbd4 acyl-Coenzyme A binding domain containing 4 [ Mus musculus (house mouse) ]

Gene ID: 67131, updated on 25-Sep-2017

Summary

Official Symbol
Acbd4provided by MGI
Official Full Name
acyl-Coenzyme A binding domain containing 4provided by MGI
Primary source
MGI:MGI:1914381
See related
Ensembl:ENSMUSG00000056938 Vega:OTTMUSG00000003297
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AI849317; 2010009P05Rik; 2010015A21Rik
Expression
Broad expression in duodenum adult (RPKM 33.3), subcutaneous fat pad adult (RPKM 30.6) and 23 other tissues See more
Orthologs

Genomic context

See Acbd4 in Genome Data Viewer
Location:
11; 11 E1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (103101688..103112199)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (102963002..102973513)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene N-myristoyltransferase 1 Neighboring gene predicted gene, 42090 Neighboring gene phospholipase C, delta 3 Neighboring gene hexamethylene bis-acetamide inducible 1 Neighboring gene hexamethylene bis-acetamide inducible 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
acyl-CoA-binding domain-containing protein 4

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025988.2NP_080264.1  acyl-CoA-binding domain-containing protein 4 isoform 1

    See identical proteins and their annotated locations for NP_080264.1

    Status: VALIDATED

    Source sequence(s)
    AK148438, AK165381, AL731805, DN173459
    UniProtKB/TrEMBL
    Q80X94
    Related
    ENSMUSP00000024492.8, ENSMUST00000024492.14
    Conserved Domains (1) summary
    pfam00887
    Location:1191
    ACBP; Acyl CoA binding protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

    Range
    103101688..103112199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001081495.1: Suppressed sequence

    Description
    NM_001081495.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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