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2310039H08Rik RIKEN cDNA 2310039H08 gene [ Mus musculus (house mouse) ]

Gene ID: 67101, updated on 12-May-2024

Summary

Official Symbol
2310039H08Rikprovided by MGI
Official Full Name
RIKEN cDNA 2310039H08 geneprovided by MGI
Primary source
MGI:MGI:1914351
See related
Ensembl:ENSMUSG00000062619 AllianceGenome:MGI:1914351
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human C6orf226 (chromosome 6 open reading frame 226). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See 2310039H08Rik in Genome Data Viewer
Location:
17 C; 17 22.9 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (47083561..47084333)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (46772635..46773407)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene canopy FGF signaling regulator 3 Neighboring gene STARR-positive B cell enhancer ABC_E2490 Neighboring gene STARR-positive B cell enhancer ABC_E3204 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:46900557-46900758 Neighboring gene pre T cell antigen receptor alpha Neighboring gene STARR-positive B cell enhancer ABC_E7539 Neighboring gene STARR-positive B cell enhancer ABC_E7540 Neighboring gene ribosomal protein L7-like 1 Neighboring gene STARR-seq mESC enhancer starr_42679 Neighboring gene STARR-seq mESC enhancer starr_42682 Neighboring gene BRD4 interacting chromatin remodeling complex associated protein like Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:46965989-46966172 Neighboring gene STARR-seq mESC enhancer starr_42687 Neighboring gene STARR-seq mESC enhancer starr_42689 Neighboring gene STARR-positive B cell enhancer ABC_E170

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C6orf226 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025966.3NP_080242.1  uncharacterized protein C6orf226 homolog

    See identical proteins and their annotated locations for NP_080242.1

    Status: VALIDATED

    Source sequence(s)
    BC038674, BU055991
    Consensus CDS
    CCDS28841.1
    UniProtKB/Swiss-Prot
    Q9D1N0, Q9D727
    Related
    ENSMUSP00000071378.6, ENSMUST00000071430.7

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    47083561..47084333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)