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Chmp1b charged multivesicular body protein 1B [ Mus musculus (house mouse) ]

Gene ID: 67064, updated on 15-Apr-2019

Summary

Official Symbol
Chmp1bprovided by MGI
Official Full Name
charged multivesicular body protein 1Bprovided by MGI
Primary source
MGI:MGI:1914314
See related
Ensembl:ENSMUSG00000109901
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Chmp1b1; 2810405I11Rik
Orthologs

Genomic context

See Chmp1b in Genome Data Viewer
Location:
18; 18 E1
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (67205359..67207887)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (67365013..67367541)

Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene melanocortin 4 receptor Neighboring gene predicted gene, 19784 Neighboring gene guanine nucleotide binding protein, alpha stimulating, olfactory type Neighboring gene metallophosphoesterase 1 Neighboring gene predicted gene, 30321 Neighboring gene inositol (myo)-1(or 4)-monophosphatase 2

Genomic regions, transcripts, and products

Pathways from BioSystems

  • ESCRT-III complex, organism-specific biosystem (from KEGG)
    ESCRT-III complex, organism-specific biosystemStructural complex; Genetic information processing; Protein processing
  • ESCRT-III complex, conserved biosystem (from KEGG)
    ESCRT-III complex, conserved biosystemStructural complex; Genetic information processing; Protein processing
  • Endocytosis, organism-specific biosystem (from KEGG)
    Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
  • Endocytosis, conserved biosystem (from KEGG)
    Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
identical protein binding ISO
Inferred from Sequence Orthology
more info
 
protein domain specific binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division ISO
Inferred from Sequence Orthology
more info
 
endosome transport via multivesicular body sorting pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
establishment of protein localization ISO
Inferred from Sequence Orthology
more info
 
late endosome to vacuole transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
midbody abscission ISO
Inferred from Sequence Orthology
more info
 
mitotic metaphase plate congression ISO
Inferred from Sequence Orthology
more info
 
nucleus organization ISO
Inferred from Sequence Orthology
more info
 
protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of centrosome duplication ISO
Inferred from Sequence Orthology
more info
 
regulation of mitotic spindle assembly ISO
Inferred from Sequence Orthology
more info
 
vacuolar transport IEA
Inferred from Electronic Annotation
more info
 
viral budding via host ESCRT complex ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
ESCRT III complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ESCRT III complex ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
endosome IEA
Inferred from Electronic Annotation
more info
 
endosome membrane ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
membrane coat ISO
Inferred from Sequence Orthology
more info
 
midbody ISO
Inferred from Sequence Orthology
more info
 
multivesicular body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
charged multivesicular body protein 1b-1
Names
chromatin modifying protein 1B
chromatin-modifying protein 1b-1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024190.2NP_077152.1  charged multivesicular body protein 1b-1

    See identical proteins and their annotated locations for NP_077152.1

    Status: VALIDATED

    Source sequence(s)
    AC140336
    Consensus CDS
    CCDS84391.1
    UniProtKB/Swiss-Prot
    Q99LU0
    Related
    ENSMUSP00000147285.1, ENSMUST00000210564.2
    Conserved Domains (1) summary
    cl21588
    Location:49189
    Snf7; Snf7

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

    Range
    67205359..67207887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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