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rpaR HTH-type quorum sensing-dependent transcriptional regulator RpaR [ Rhodopseudomonas palustris ]

Gene ID: 66891331, updated on 30-Mar-2025
Gene symbol
rpaR
Gene description
HTH-type quorum sensing-dependent transcriptional regulator RpaR
Locus tag
I8G32_RS01665
Gene type
protein coding
Organism
Rhodopseudomonas palustris (strain: RCB100)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas
Old locus tag
I8G32_00334
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NZ_CP066699.1Genomic Context describing neighboring genes Neighboring gene YifB family Mg chelatase-like AAA ATPase Neighboring gene hypothetical protein Neighboring gene 4-coumaroyl-homoserine lactone synthase Neighboring gene glutathione synthase Neighboring gene YraN family protein Neighboring gene 16S rRNA (cytidine(1402)-2'-O)-methyltransferase

Genomic Sequence:
NZ_CP066699.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A new class of homoserine lactone quorum-sensing signals. Schaefer AL, et al. Nature, 2008 Jul 31. PMID 18563084

GeneRIFs: Gene References Into Functions

Preferred Names
HTH-type quorum sensing-dependent transcriptional regulator RpaR

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP066699.1 Reference assembly

    Range
    348672..349403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011155889.1 HTH-type quorum sensing-dependent transcriptional regulator RpaR [Rhodopseudomonas palustris]

    See identical proteins and their annotated locations for WP_011155889.1

    UniProtKB/Swiss-Prot
    Q6NCZ5
    UniProtKB/TrEMBL
    A0AAF0BN65
    Conserved Domains (2) summary
    smart00421
    Location:180 → 235
    HTH_LUXR; helix_turn_helix, Lux Regulon
    pfam03472
    Location:27 → 167
    Autoind_bind; Autoinducer binding domain
Nucleotide Protein
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Gene LinkOut

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Research Materials