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Speer1d spermatogenesis associated glutamate (E)-rich protein 1D [ Mus musculus (house mouse) ]

Gene ID: 667948, updated on 8-Feb-2024

Summary

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Official Symbol
Speer1dprovided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 1Dprovided by MGI
Primary source
MGI:MGI:3779817
See related
AllianceGenome:MGI:3779817
Gene type
pseudo
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm8890
Expression
Restricted expression toward testis adult (RPKM 45.4) See more
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Genomic context

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Location:
5 A1; 5 3.83 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (11304931..11310750)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (11254964..11260783)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene predicted gene 4047 Neighboring gene predicted gene, 29743 Neighboring gene predicted gene, 33093 Neighboring gene STARR-positive B cell enhancer mm9_chr5:11256396-11256696 Neighboring gene STARR-positive B cell enhancer mm9_chr5:11261673-11261974 Neighboring gene anaphase-promoting complex subunit 5 pseudogene Neighboring gene predicted gene, 32877

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    11304931..11310750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_376757.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases