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Nt5el 5' nucleotidase, ecto-like [ Mus musculus (house mouse) ]

Gene ID: 66763, updated on 26-Sep-2022

Summary

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Official Symbol
Nt5elprovided by MGI
Official Full Name
5' nucleotidase, ecto-likeprovided by MGI
Primary source
MGI:MGI:1914013
See related
Ensembl:ENSMUSG00000021718 AllianceGenome:MGI:1914013
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4933425L06Rik
Expression
Restricted expression toward testis adult (RPKM 1.1) See more
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Genomic context

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See Nt5el in Genome Data Viewer
Location:
13; 13 D1
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (105218630..105258290)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (105082122..105121782)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41048 Neighboring gene H3 histone, family 3 pseudogene Neighboring gene regulator of G-protein signalling 7 binding protein Neighboring gene ring finger protein 180 Neighboring gene predicted gene, 25631 Neighboring gene predicted gene, 41049

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. Adissu HA, et al. Dis Model Mech, 2014 May. PMID 24652767, Free PMC Article
  2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (11) citations in PubMed

See citations in PubMed for homologs of this gene provided by HomoloGene

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Clone Names

  • MGC141320

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC66763

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025751.3 → NP_080027.1  uncharacterized protein LOC66763

    See identical proteins and their annotated locations for NP_080027.1

    Status: PREDICTED

    Source sequence(s)
    AC154281
    Consensus CDS
    CCDS26755.1
    UniProtKB/TrEMBL
    Q9D3Z8
    Related
    ENSMUSP00000022232.6, ENSMUST00000022232.6
    Conserved Domains (3) summary
    TIGR01530
    Location:40 → 470
    nadN; NAD pyrophosphatase/5'-nucleotidase NadN
    cd07406
    Location:40 → 293
    MPP_CG11883_N; Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain
    pfam02872
    Location:328 → 466
    5_nucleotid_C; 5'-nucleotidase, C-terminal domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    105218630..105258290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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