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Ccdc96 coiled-coil domain containing 96 [ Mus musculus (house mouse) ]

Gene ID: 66717, updated on 26-Sep-2022

Summary

Official Symbol
Ccdc96provided by MGI
Official Full Name
coiled-coil domain containing 96provided by MGI
Primary source
MGI:MGI:1913967
See related
Ensembl:ENSMUSG00000050677 AllianceGenome:MGI:1913967
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4921513E08Rik
Summary
Predicted to be involved in cilium assembly. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in axoneme and ciliary basal body. Is expressed in olfactory epithelium. Orthologous to human CCDC96 (coiled-coil domain containing 96). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Ccdc96 in Genome Data Viewer
Location:
5; 5 B3
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (36641932..36645515)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (36484588..36488171)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2210406O10 gene Neighboring gene GrpE-like 1, mitochondrial Neighboring gene transcriptional adaptor 2B Neighboring gene TBC1 domain family, member 14 Neighboring gene predicted gene, 32528 Neighboring gene DNA segment, Chr 5, ERATO Doi 579, expressed Neighboring gene predicted gene, 32584

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 96

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025725.3NP_080001.1  coiled-coil domain-containing protein 96

    See identical proteins and their annotated locations for NP_080001.1

    Status: VALIDATED

    Source sequence(s)
    AK014878, AK030023
    Consensus CDS
    CCDS19239.1
    UniProtKB/Swiss-Prot
    Q9CR92
    Related
    ENSMUSP00000059636.2, ENSMUST00000060100.3
    Conserved Domains (1) summary
    pfam13870
    Location:394570
    DUF4201; Domain of unknown function (DUF4201)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    36641932..36645515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)