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2810004N23Rik RIKEN cDNA 2810004N23 gene [ Mus musculus (house mouse) ]

Gene ID: 66523, updated on 26-Sep-2022

Summary

Official Symbol
2810004N23Rikprovided by MGI
Official Full Name
RIKEN cDNA 2810004N23 geneprovided by MGI
Primary source
MGI:MGI:1913773
See related
Ensembl:ENSMUSG00000031984 AllianceGenome:MGI:1913773
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ayu21-55; GtAyu21-55; 3110004G14Rik; Gt(pU21)55Imeg
Summary
Predicted to be located in chromosome. Orthologous to human C1orf131 (chromosome 1 open reading frame 131). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 13.6), liver E14 (RPKM 11.8) and 28 other tissues See more
Orthologs
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Genomic context

See 2810004N23Rik in Genome Data Viewer
Location:
8; 8 E2
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (125566094..125589768, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (124839355..124863029, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene general transcription factor IIB pseudogene Neighboring gene predicted gene, 46059 Neighboring gene tripartite motif-containing 67 Neighboring gene glyceronephosphate O-acyltransferase Neighboring gene exocyst complex component 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in chromosome ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
uncharacterized protein C1orf131 homolog
Names
Ayu21-55Imeg
Gt(Ayu21)55Imeg

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025615.2NP_079891.2  uncharacterized protein C1orf131 homolog

    See identical proteins and their annotated locations for NP_079891.2

    Status: VALIDATED

    Source sequence(s)
    AK011944, AK143919, BY030694
    Consensus CDS
    CCDS22775.1
    UniProtKB/Swiss-Prot
    Q8CIL4, Q9CZF4
    UniProtKB/TrEMBL
    A0A8C6HSH1, Q9CSU7
    Related
    ENSMUSP00000034465.8, ENSMUST00000034465.9
    Conserved Domains (1) summary
    pfam15375
    Location:132239
    DUF4602; Domain of unknown function (DUF4602)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    125566094..125589768 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)