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2810001G20Rik RIKEN cDNA 2810001G20 gene [ Mus musculus (house mouse) ]

Gene ID: 66456, updated on 8-Feb-2024

Summary

Official Symbol
2810001G20Rikprovided by MGI
Official Full Name
RIKEN cDNA 2810001G20 geneprovided by MGI
Primary source
MGI:MGI:1913706
See related
Ensembl:ENSMUSG00000087497 AllianceGenome:MGI:1913706
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in CNS E11.5 (RPKM 13.8), CNS E14 (RPKM 10.1) and 23 other tissues See more
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Genomic context

See 2810001G20Rik in Genome Data Viewer
Location:
11 B3; 11 39.66 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (63970310..63974085)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (64079484..64083259)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 Neighboring gene predicted gene 12289 Neighboring gene predicted gene, 51866 Neighboring gene STARR-seq mESC enhancer starr_29751 Neighboring gene STARR-seq mESC enhancer starr_29752 Neighboring gene STARR-seq mESC enhancer starr_29754 Neighboring gene predicted gene 12290 Neighboring gene predicted gene, 53711

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033780.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK007927, BU756145
    Related
    ENSMUST00000135037.9

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    63970310..63974085
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)