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Adprm ADP-ribose/CDP-alcohol diphosphatase, manganese dependent [ Mus musculus (house mouse) ]

Gene ID: 66358, updated on 25-Sep-2020

Summary

Official Symbol
Adprmprovided by MGI
Official Full Name
ADP-ribose/CDP-alcohol diphosphatase, manganese dependentprovided by MGI
Primary source
MGI:MGI:1913608
See related
Ensembl:ENSMUSG00000020910
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MDS006; 2310004I24Rik
Expression
Ubiquitous expression in large intestine adult (RPKM 7.4), bladder adult (RPKM 7.0) and 28 other tissues See more
Orthologs

Genomic context

See Adprm in Genome Data Viewer
Location:
11; 11 B3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (66928706..66943481, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (67037880..67052631, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (66851382..66866120, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12299 Neighboring gene transmembrane protein 220 Neighboring gene SCO1 cytochrome c oxidase assembly protein Neighboring gene myosin, heavy polypeptide 3, skeletal muscle, embryonic Neighboring gene microRNA 6923 Neighboring gene RIKEN cDNA 2310065F04 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
2',3'-cyclic-nucleotide 2'-phosphodiesterase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ADP-ribose diphosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
CDP-glycerol diphosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
manganese ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
Names
ADP-ribose/CDP-alcohol pyrophosphatase
ADPRibase-Mn
CDP-choline phosphohydrolase
NP_079786.2
XP_006534003.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025510.3NP_079786.2  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase

    See identical proteins and their annotated locations for NP_079786.2

    Status: VALIDATED

    Source sequence(s)
    AK145941, BY118851
    Consensus CDS
    CCDS48820.1
    UniProtKB/Swiss-Prot
    Q99KS6
    Related
    ENSMUSP00000112064.1, ENSMUST00000116363.1
    Conserved Domains (1) summary
    cd07396
    Location:18322
    MPP_Nbla03831; Homo sapiens Nbla03831 and related proteins, metallophosphatase domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    66928706..66943481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006533940.4XP_006534003.1  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase isoform X1

    See identical proteins and their annotated locations for XP_006534003.1

    UniProtKB/Swiss-Prot
    Q99KS6
    Conserved Domains (1) summary
    cd07396
    Location:18322
    MPP_Nbla03831; Homo sapiens Nbla03831 and related proteins, metallophosphatase domain
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