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Ostc oligosaccharyltransferase complex subunit (non-catalytic) [ Mus musculus (house mouse) ]

Gene ID: 66357, updated on 1-Mar-2024

Summary

Official Symbol
Ostcprovided by MGI
Official Full Name
oligosaccharyltransferase complex subunit (non-catalytic)provided by MGI
Primary source
MGI:MGI:1913607
See related
Ensembl:ENSMUSG00000041084 AllianceGenome:MGI:1913607
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2310008M10Rik; 5730557H03Rik
Summary
Predicted to be involved in protein glycosylation. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be part of oligosaccharyltransferase complex. Is expressed in several structures, including Meckel's cartilage; central nervous system; pancreas epithelium; retina; and skeleton. Orthologous to human OSTC (oligosaccharyltransferase complex non-catalytic subunit). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in placenta adult (RPKM 137.0), liver E18 (RPKM 84.4) and 27 other tissues See more
Orthologs
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Genomic context

See Ostc in Genome Data Viewer
Location:
3 G3; 3 60.53 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (130489566..130503093, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (130695917..130709444, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene ethanolamine phosphate phospholyase Neighboring gene predicted gene, 36322 Neighboring gene predicted gene, 36373 Neighboring gene STARR-positive B cell enhancer ABC_E4590 Neighboring gene STARR-positive B cell enhancer ABC_E4591 Neighboring gene STARR-positive B cell enhancer ABC_E828 Neighboring gene STARR-positive B cell enhancer ABC_E1266 Neighboring gene STARR-seq mESC enhancer starr_08989 Neighboring gene ribosomal protein L34 Neighboring gene predicted gene 43522

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane NAS
Non-traceable Author Statement
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
part_of oligosaccharyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of oligosaccharyltransferase complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
oligosaccharyltransferase complex subunit OSTC

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025509.3NP_079785.1  oligosaccharyltransferase complex subunit OSTC

    See identical proteins and their annotated locations for NP_079785.1

    Status: VALIDATED

    Source sequence(s)
    AK011085, BP770975, BY228396
    Consensus CDS
    CCDS38639.1
    UniProtKB/Swiss-Prot
    Q78XF5, Q9CPZ2
    Related
    ENSMUSP00000046480.8, ENSMUST00000043937.9
    Conserved Domains (1) summary
    pfam04756
    Location:17146
    OST3_OST6; OST3 / OST6 family, transporter family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    130489566..130503093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)