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Mrps21 mitochondrial ribosomal protein S21 [ Mus musculus (house mouse) ]

Gene ID: 66292, updated on 30-Apr-2024

Summary

Official Symbol
Mrps21provided by MGI
Official Full Name
mitochondrial ribosomal protein S21provided by MGI
Primary source
MGI:MGI:1913542
See related
Ensembl:ENSMUSG00000054312 AllianceGenome:MGI:1913542
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
S21mt; 1810031B19Rik
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Located in mitochondrial inner membrane. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPS21 (mitochondrial ribosomal protein S21). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in bladder adult (RPKM 59.5), CNS E11.5 (RPKM 58.3) and 28 other tissues See more
Orthologs
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Genomic context

See Mrps21 in Genome Data Viewer
Location:
3 F2.1; 3 41.36 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (95769946..95778826, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (95862634..95871514, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene regulation of nuclear pre-mRNA domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_08396 Neighboring gene predicted gene, 29948 Neighboring gene pre-mRNA processing factor 3 Neighboring gene STARR-positive B cell enhancer ABC_E10199 Neighboring gene RIKEN cDNA C920021L13 gene Neighboring gene STARR-positive B cell enhancer ABC_E9562 Neighboring gene cDNA sequence BC028528 Neighboring gene circadian associated repressor of transcription Neighboring gene STARR-positive B cell enhancer ABC_E2673 Neighboring gene aph1 homolog A, gamma secretase subunit Neighboring gene carbonic anhydrase 14

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
small ribosomal subunit protein bS21m
Names
28S ribosomal protein S21, mitochondrial
NP_001342688.1
NP_510964.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355759.1NP_001342688.1  small ribosomal subunit protein bS21m

    Status: VALIDATED

    Source sequence(s)
    AC092855, AC093317, AK008265
    Consensus CDS
    CCDS38550.1
    UniProtKB/Swiss-Prot
    P58059
    UniProtKB/TrEMBL
    Q059G7
    Related
    ENSMUSP00000066990.5, ENSMUST00000067298.5
    Conserved Domains (1) summary
    TIGR00030
    Location:1066
    S21p; ribosomal protein S21
  2. NM_078479.4NP_510964.1  small ribosomal subunit protein bS21m

    See identical proteins and their annotated locations for NP_510964.1

    Status: VALIDATED

    Source sequence(s)
    AC092855, AC093317, BC027546
    Consensus CDS
    CCDS38550.1
    UniProtKB/Swiss-Prot
    P58059
    UniProtKB/TrEMBL
    Q059G7
    Conserved Domains (1) summary
    TIGR00030
    Location:1066
    S21p; ribosomal protein S21

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    95769946..95778826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)