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LOC6628919 beta-galactosidase [ Drosophila virilis ]

Gene ID: 6628919, updated on 14-Dec-2023

Summary

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Gene symbol
LOC6628919
Gene description
beta-galactosidase
Locus tag
Dvir_GJ12525
See related
EnsemblRapid:LOC6628919
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GJ12525; GJ12525-PA
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Genomic context

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See LOC6628919 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587571.1 (7160141..7163445, complement)

NW_022587571.1Genomic Context describing neighboring genes Neighboring gene sphingolipid delta(4)-desaturase DES1 Neighboring gene lysine-specific demethylase lid Neighboring gene tetraspanin-17 Neighboring gene SH2 domain-containing protein 3C Neighboring gene homeobox protein H2.0

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587571 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase
Names
Dvir\GJ12525
Dvir\GJ12525-PA
dvir_GLEANR_1249

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587571.1 Reference DvirRS2

    Range
    7160141..7163445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032437657.1 → XP_032293548.1  beta-galactosidase isoform X2

    Related
    XP_032293548.1, XM_032437657.1
    Conserved Domains (2) summary
    pfam01301
    Location:63 → 386
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:581 → 651
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain

  2. XM_002051351.3 → XP_002051387.1  beta-galactosidase isoform X1

    See identical proteins and their annotated locations for XP_002051387.1

    UniProtKB/TrEMBL
    B4LR78
    Related
    XP_002051387.1, XM_002051351.3
    Conserved Domains (2) summary
    pfam01301
    Location:65 → 388
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:583 → 645
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain
Nucleotide Protein Strain
Heading Accession and Version

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